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arXiv preprints from January 1, 2026 through September 18, 2026 — 18:36:26 EST

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Posted in q-bio.NC · 2026-09-17 · Wiesław L. Galus, Janusz A. Starzyk

A Mathematical Model of Motivated Emotional Mind - Cognitive Embodied System

This article presents a mathematical model of the Motivated Emotional Mind cognitive architecture developed for embodied intelligent systems. Such a system learns to maintain its homeostasis through a generalized form of reinforcement learning based on its internal motivations, termed motivated learning (ML). The principal...

💬 0 commentsarXiv:2609.20437v1PDF
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Posted in cs.LG · 2026-09-17 · Junda Ying, Zhiwei Zeng, Peijie Zhou, Lei Zhang

Dynamic Generalized Gromov-Wasserstein Optimal Transport

Gromov--Wasserstein optimal transport (GW-OT) extends classical optimal transport by introducing structure-aware transport cost. This is particularly relevant for spatial transcriptomics, where dynamical reconstruction should preserve tissue structure in addition to matching expression patterns. While static formulations have been...

💬 0 commentsarXiv:2609.20008v1PDF
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Posted in physics.med-ph · 2026-09-17 · Catarina N Carvalho, Andreia S Gaspar, Rita G Nunes, Teresa M Correia

T2 estimation from MOLLI acquisitions

Cardiac T1 and T2 quantitative magnetic resonance imaging (MRI) is a technique that provides characterization of a multitude of myocardial pathologies. However, each parameter requires its own specialized acquisition sequence, which may be time-consuming. In this work, we demonstrate that MOLLI, an acquisition sequence commonly used...

💬 0 commentsarXiv:2609.19987v1PDF
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Posted in q-bio.PE · 2026-09-17 · Sanyam Jain, Felix Simon Reimers, Stefano Nichele

Self-Replicating Neural Cellular Automata: Quantifying Emergent Phenotypic and Genotypic Diversity in an OpenEnded Substrate

We study an in-silico substrate in which every pixel of a two-channel cellular-automata grid carries a tiny neural network (an agent) that senses its Moore neighborhood. A cell persists only by self-replication: a living neighbor is cloned and its weights are mutated by a uniform perturbation, so that phenotype (cell state) is driven...

💬 0 commentsarXiv:2609.19902v1PDF
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Posted in q-bio.GN · 2026-09-17 · Tohid Ghasemnejad, Ahmadreza Argha, Mark Grosser, John Wang, Min Yang, Thantrira Porntaveetus, Tony Roscioli, Nigel H. Lovell, Mahmoud Aarabi, Hamid Alinejad-Rokny

Large Language Model Agents for Evidence Based Genetic Disease Severity Classification

Disease severity classification for genetic conditions is subjective and labor-intensive, creating bottlenecks in genomic screening, where commercial panels vary widely in size and overlap. We developed an autonomous AI agent integrating Reasoning and Acting (ReAct) with Retrieval-Augmented Generation (RAG) to classify 10,211 Human...

💬 0 commentsarXiv:2609.19569v1PDF
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Posted in cs.LG · 2026-09-16 · Kaitlin Zareno, Jarett Dewbury, Siamak K. Sorooshyari, Hossein Mobahi, Loza F. Tadesse

Sharpness-Aware Minimization (SAM) Improves Classification Accuracy of Bacterial Raman Spectral Data Enabling Portable Diagnostics

Antimicrobial resistance is expected to claim 10 million lives per year by 2050, and resource-limited regions are most affected. Raman spectroscopy is a novel pathogen diagnostic approach promising rapid and portable antibiotic resistance testing within a few hours, compared to days when using gold standard methods. However, current...

💬 0 commentsarXiv:2609.19453v1PDF
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Posted in q-bio.TO · 2026-09-16 · Alexandra Lawryshyn, Hermann J. Eberl, Thomas Hillen

A Combined ODE Model of Carbohydrate Fermentation and Colorectal Cancer

We formulate and analyze a system of non-linear ordinary differential equations that describe key metabolic and immunological interactions between butyrate produced by fiber-fermenting gut microbiota, colorectal cancer cells and host cell populations. The model is studied both independently and in conjunction with a pre-existing...

💬 0 commentsarXiv:2609.19371v1PDF
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Posted in cs.HC · 2026-09-16 · Venkatesh Sivaraman, Rigney Turnham, George Bonano, Nevin Aresh, Renumathy Dhanasekaran, Margaret Guo, Sindhu Kubendran, Olivia Lin, Jonathan D Louie, Kristan Olazo, Jeanne Shen, Harish Vasudevan, Jeanette Wong, Emily Alsentzer, Jason A Fries, Anobel Odisho, John Gordan, Jean Feng, Julian C Hong

"I Know Where to Look," But Does the LLM? Charting the Gaps Between Clinical Expert Needs and Unstructured Data Abstraction Tools

Clinical data abstraction, the process of distilling structured information from patient records, plays a key role in advancing knowledge about diseases such as cancer. Information extraction (IE) with large language models (LLMs) could accelerate this process, but it is unclear whether current frameworks effectively support clinical...

💬 0 commentsarXiv:2609.19318v1PDF
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Posted in q-bio.OT · 2026-09-15 · Shanli Ding, Yiyi Hu, Ziyu Fu, Chia-Hsin Lin, Ruihan Luo, Jaehee Chun, Xinyue Zhang, Osama Mawlawi

Flash-Radiomics: A Scalable Hybrid CPU-CUDA Engine for Standardized Scalar Radiomics and Accelerated Spatial Mapping

Background and Objectives: Spatial mapping retains the spatial distribution of radiomic features, but computational cost and fragmented software limit its use. We developed Flash-Radiomics with scalar extraction and spatial mapping, a central processing unit (CPU) backend, a hybrid Compute Unified Device Architecture (CUDA) backend,...

💬 0 commentsarXiv:2609.19190v1PDF
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Posted in stat.ME · 2026-09-15 · Takes Fujita, Nobutaka Hattori

When AI Generates Covariates: Causal Typing and Estimand Drift in Sequential Experiments

AI-generated covariates from notes, conversations, images, and wearable streams can change the causal question when their roles are left unspecified. A generated feature may represent a treatment version, pre-action state, history, design variable, mediator, outcome proxy, observation process, or intercurrent event; these roles are...

💬 0 commentsarXiv:2609.17772v1PDF
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Posted in math.ST · 2026-09-17 · Alex Bernstein, Lisa R. Goldberg, Nicholas Gunther, Alec N. Kercheval, Tian Lan, Yian Lin, Dayi Yao

Principal component error in high-dimensional factor models

In a statistical factor model, principal components (or eigenvectors) of a sample covariance matrix serve as estimates of {\it principal directions}, the true drivers of co-movement of a collection of observed variables. We write the often substantial error in these estimates as a sum of two interpretable terms, which we show have...

💬 0 commentsarXiv:2609.20550v1PDF
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Posted in cs.AI · 2026-09-17 · Veronika Batzdorfer, Carlo Romano Marcello Alessandro Santagiustina

Reproducibility is not construct validity: LLM measurement of institutionally situated communication

High annotation reproducibility does not necessarily imply that an LLM-inferred measure captures the construct it is intended to measure. We test this distinction using a dataset from the European Commission's AI Act consultation, linking structured survey responses to free-text consultation submissions from the same stakeholders. LLM...

💬 0 commentsarXiv:2609.19866v1PDF
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Posted in econ.EM · 2026-09-17 · Lorenzo Muñoz, Stephane Hess, Thomas O. Hancock, Georges Sfeir

Using machine learning metrics to provide deeper insights into the performance of choice models

Machine learning (ML) techniques are increasingly drawing interest in the choice modelling (CM) field. The focus has primarily been on comparing the performance of these contrasting approaches or on improving behavioural insights for ML techniques, rather than translating ideas from one field into the other. In the present paper, we...

💬 0 commentsarXiv:2609.20655v1PDF
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Posted in econ.GN · 2026-09-17 · Haiqiang Chen, Li Chen, Yunlong Chen, Difang Huang, Bo Zhang

Does Training on Future Data Pay? Look-Ahead Bias in Forecasting with Pretrained Models

We examine whether post-origin training information inflates the measured accuracy and economic value of financial forecasts. We evaluate five sets of financial time-series foundation models, each comprising independently trained annual vintages under U.S., global, and factor-augmented training environments, across 14 equity markets...

💬 0 commentsarXiv:2609.20554v1PDF
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Posted in econ.GN · 2026-09-17 · Jan van de Poll

Unpriced Internal Externalities and Structural Inefficiency in Organizations

Organizations often invest substantial effort in improving internal mechanisms such as processes, governance, and technology, yet realize only modest performance gains. This paper proposes a structural explanation for this pattern. We introduce the concept of internal externalities: unpriced cross-effects generated by internal...

💬 0 commentsarXiv:2609.20462v1PDF
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Posted in econ.EM · 2026-09-17 · Marina Telezhkina, Dominik Wied

Cosine metric as a structural economic similarity measure

Structural similarity, the extent to which economic mechanisms respond alike to common shocks, matters for economic forecasting, policy transfer, and other decisions that rely on evidence from comparable settings. For mechanisms approximated by linear models, this idea has a simple geometric representation: The smaller the angle...

💬 0 commentsarXiv:2609.20424v1PDF
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Posted in econ.TH · 2026-09-17 · Tongseok Lim

Stable Allocations, Unstable Payment Paths: The Shapley Value and Voluntary Coalition Formation

The random-order interpretation of the Shapley value specifies both a terminal allocation and a payment path: when a player enters, she receives her marginal contribution at that moment. We ask whether players would voluntarily follow this path. A player may prefer to wait if her marginal contribution is expected to rise as the...

💬 0 commentsarXiv:2609.20421v1PDF
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Posted in econ.GN · 2026-09-17 · Jordan Roulleau-Pasdeloup

An Arbitrarily Precise Global Closed Form Approximation for the Neoclassical Growth Model

I consider a neoclassical growth model with a constant absolute risk aversion (CARA) utility function and derive a global closed form approximation that is arbitrarily precise as the discount rate $ρ$ is close to the population growth rate $n$. I use it to show that the consumption function is strictly concave and that countries can...

💬 0 commentsarXiv:2609.20405v1PDF
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Posted in econ.GN · 2026-09-17 · Sebastian Kranz

Tradeable Import Certificates for Strategic Supply Security

Recent crises have made supply security central to trade policy. We show how tradeable import certificates (TIC) implement targets for domestic production and reliable foreign supply while preserving gains from trade. A single certificate market per country decentralizes the welfare-maximizing allocation under heterogeneous targets,...

💬 0 commentsarXiv:2609.20282v1PDF
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Posted in econ.TH · 2026-09-17 · Nadia Guiñazú, Noelia Juarez, Paola Manasero, Pablo Neme, Jorge Oviedo

A polyhedral characterization of worker-quasi-stable matchings

We provide the first polyhedral characterization of worker-quasi-stable matchings in the classical one-to-one matching model. By modifying the classical stability constraints, we introduce a convex polytope and prove that it is integral. Consequently, its extreme points coincide exactly with the incidence vectors of...

💬 0 commentsarXiv:2609.20032v1PDF
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Posted in econ.GN · 2026-09-17 · Chengqi Zang, Gabriel P. Andrade, Tomoyuki Nakajima

Who Aggregates Information? Screening, Rent, and the Coexistence of CLOB and AMM Prediction Markets

Prediction-market shares differ from traditional financial products in that, with no information or outside utility, classical delta-neutral Central Limit Order Book~(CLOB) market making cannot be financed by payoff-uninformative noise flow. Transaction-level evidence from a major prediction-market CLOB platform shows makers profiting...

💬 0 commentsarXiv:2609.20017v1PDF
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Posted in econ.TH · 2026-09-17 · Philipp Peitler

Rational Bargaining: Characterization and Implementation

The von Neumann-Morgenstern axioms are uncontroversial desiderata for individual decision-making. We say that a bargaining solution is rational if it can be interpreted as the most preferred alternatives under these axioms. Yet, neither the Nash nor the Kalai-Smorodinsky bargaining solution is rational in this sense. We formalize two...

💬 0 commentsarXiv:2609.19932v1PDF
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Posted in econ.TH · 2026-09-17 · Philipp Peitler, Karl H. Schlag

Putting Context into Preference Aggregation

The axioms underlying Arrow's impossibility theorem are very restrictive in terms of what can be used when aggregating preferences. Social preferences may not depend on the menu nor on preferences over alternatives outside the menu. But context matters. So, we weaken these restrictions to allow for context to be included. The context,...

💬 0 commentsarXiv:2609.19888v1PDF
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Posted in cs.AI · 2026-09-17 · Haya Halimeh, Sascha Kaltenpoth, Kevin Bösch, Oliver Müller

A Dual-Process Perspective on Nudge Susceptibility in LLM-Based GUI Agents

LLM-based GUI agents increasingly act on behalf of users in digital environments that were designed with human users in mind. These graphical user interfaces were designed to support, but also deliberately steer, the behaviour and decisions of users. While behavioural biases in the textual outputs of LLMs are well-documented, far less...

💬 0 commentsarXiv:2609.19843v1PDF
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Posted in econ.TH · 2026-09-17 · Georgy Lukyanov, Muslim Salakhov

Anonymous Accountability

We ask how an expert panel should disclose auditable conflicts of interest when reports are named and experts care about their reputations for ability. Before sealed binary assessments are filed, an auditor commits to disclosing no orientation information, each named expert's orientation, or only the number of experts oriented in each...

💬 0 commentsarXiv:2609.19771v1PDF